Assistant Professor, @fredhutch @HutchBasicSci & Translational Data Science IRC. Computational biologist | Single-cell data analysis and modeling.
Seattle, WA
Joined January 2011
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Manu Setty retweeted
Awesome week at Bertinoro #CompBio meeting! Exciting times for cancer evolution x tumor microenvironment! Thank you @SohrabShah @jens_lagergren
Wonderful Bertinoro Computational Biology meeting, Russel Schwarz summarizing a lot of effort going on in the field of modeling tumor biology in the fresco room. Taking place among puring rain around the hill. Thank you for the invitation @SohrabShah @jens_lagergren @elhamazizi
Manu Setty retweeted
1/8 Today we highlight exciting work from the @SettyM lab that introduces Mellon, a new approach for quantifying cell-state densities from single-cell data with a particular focus on differentiating systems. biorxiv.org/content/10.1101/…
Manu Setty retweeted
Are you an early career scientist who wants to pursue a research project in the lab of @fredhutch Computational Biologist mentor? If yes, then the #MahanFellowship is for you. Now accepting applications. Deadline is Dec. 9, 2022. Learn more: bit.ly/3euFJmh
Manu Setty retweeted
We have an open faculty search @FredHutch in Seattle & are looking for a new PI to join us: bit.ly/join-hutch 🧪🧬 I always speak in hyperboles, but I've had the best time starting my lab here. DM me if you have questions or wanna hear me hype @HutchBasicSci more.
Manu Setty retweeted
Science teacher and former research scientist Dr. Janhavi Gupta from New Jersey writes about learning to code as a Teacher Fellow in the lab of Dr. Manu Setty. Check out our Hutch Teacher Fellowship Blog for her story, “Code to Decode Mysteries of Cellular Processes.” @fredhutch
Manu Setty retweeted
We're #hiring for a faculty position in our Basic Sciences Division (@HutchBasicSci)! Of special interest are candidates who have expertise in #CryoEM and/or #CryoET. Learn more and apply: apply.interfolio.com/112458
Manu Setty retweeted
Are you an early career scientist who wants to pursue a research project in the lab of a @fredhutch computational biologist? If yes, then the #MahanFellowship is for you. Now accepting applications. Deadline is Dec. 9, 2022. Learn more: bit.ly/3euFJmh
Manu Setty retweeted
The paper submission deadline is around the corner!
The deadline for paper submission @icml_compbio, the workshop on Computational Biology at ICML 2022 @icmlconf, is May 8th.
Check out more details at icml-compbio.github.io
Manu Setty retweeted
How does a skin cell become melanoma? We built one to find out, to help understand this lethal disease. science.org/doi/10.1126/scie… @ScienceMagazine W/ co-1st @ele_tt, @johnkwon71, & senior author Aviv Regev. Early years joint w/ @LeviAGarraway. And many others in last tweet! 🧵 1/18
Manu Setty retweeted
Two fantastic speakers lined up for #FridayNightTalks!
For everyone @FredHutch, join us in Pelton Auditorium or virtually on Zoom to hear about the latest research from Dominik Otto in the @SettyM Lab and Navonil DeSarkar in Human Biology’s Nelson Lab. Starts at 4!
ALT Friday Night Talks
Manu Setty retweeted
“For 2023, we will offer all 51 of our journal volumes under the S2O business model. We want to become a fully open access publisher.” President and Editor-In-Chief @richardg_ar.
arevie.ws/S2O_launch
#Subscribe2Open #OpenAccess #AcademicPublishing
Manu Setty retweeted
Please RT: Submissions to #ICML2022 #compbio workshop due May 8th! Can't wait to see everyone in person this year!!! 😃 #WCB2022 #MachineLearning #CFP #computationalbiology #Bioinformatics @ColumbiaBME @Cancer_dynamics
We are calling for papers for the workshop on Computational Biology at ICML 2022 @icmlconf #icml2022 #wcb2022. The workshop will be in person with some virtual features this year. Check out more details at 👉 icml-compbio.github.io
Manu Setty retweeted
@HsiehLab joins the @bioRxiv party. Happy to share work by @Alexand14820052 that explores prostate cancer progression 1 cell at a time. Spoiler alert: tumor heterogeneity, immune landscape, and cell type specific protein synthesis (of course)! biorxiv.org/content/10.1101/…
Manu Setty retweeted
Our free Single Cell Genomics Day workshop is starting in a few minutes! You can see the full agenda at satijalab.org/scgd, and follow along with the talks on our Youtube livestream below:
youtube.com/watch?v=txIhU1Yr…
Manu Setty retweeted
Congratulations to the thirteen 2022 Weintraub awardees @WeintraubAward fredhutch.org/en/news/releas…
Manu Setty retweeted
Interested in applying for the 2022 Dr. Eddie Méndez Scholar Award? Tune in to one of the virtual info sessions on March 3 and March 14 to learn more about the award and connect with Méndez Scholar Awardees. Zoom info here: bit.ly/3p3I7CD
Manu Setty retweeted
Interested in single cell genomics but need help getting started? Check out the full agenda for our Single Cell Genomics Day next Friday (3/4). All talks will be live-streamed (no registration required) at satijalab.org/scgd22
Manu Setty retweeted
1/8 Today we highlight a preprint from the Henikoff and @SettyM labs that introduces CUT&Tag2for1, an adaptation of their low salt CUT&Tag method (CUTAC) that simultaneously measures active and repressive regulatory elements in bulk or in single cells. biorxiv.org/content/10.1101/…
Manu Setty retweeted
Interested in spatial omics? Plz check out our squidpy tool, bringing together omics & image analysis to enable a scalable description of spatial molecular data. Out today @naturemethods thx to @g_palla1, @HannahSpitzer1 & team! nature.com/articles/s41592-0… github.com/theislab/squidpy
