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PyRosetta

@PyRosetta

PyRosetta is an interactive Python-based interface to the powerful Rosetta molecular modeling suite.

 Baltimore, MD, USA
pyrosetta.org
Joined September 2009
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.@RichBonneauNYU explains peptidomimetic design at #rcon15 @rosettacon
Image from Jeffrey J. Gray (@jeffreyjgray)
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Rosetta Commons interns present posters, discuss protein folding at #RCon15 @RosettaCon @NSF #REU
Image from Jeffrey J. Gray (@jeffreyjgray)
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PyMOL integration is now available in PyRosetta! For details see plosone.org/article/info%3Ad…
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PyRosetta 2.0 beta is available now. Access nearly all of Rosetta, new build system, use expanded help and more! http://bit.ly/dJV7ZS
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New release will also include additional wrapped Rosetta namespaces, including RNA, Co nstraintSet, and Docking. DM additional requests.
Brian Weitzner demonstrated a PyRosetta-PyMOL link feature at RosettaCon this week. The feature will be included in the release this fall.
An Applications Note in the journal Bioinformatics introducing PyRosetta is now available through advanced access. http://tiny.cc/NVAHk
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PyRosetta v1.1 is now available to download! It now supports Windows and Linux 64-bit platforms. http://tiny.cc/maY5X
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Dr. Jeffrey Gray is giving a demo/presentation on PyRosetta at the AIChE conference in Nashville on Wednesday! http://bit.ly/erY6H
PyRosetta is first cited in publication! Dr.Donald Berkholtz's work on peptide bond geometry, in the current issue of Structure
PyRosetta Release v1.0 is now available for download! Please see the website and user forums for more information. http://bit.ly/aRCNZ
The PyRosetta user forums are now up and running! http://bit.ly/10IZCe
A bound workbook bundling all of the PyRosetta tutorials and coding reference sheets is available for purchase! http://bit.ly/2UVNuc
An updated set of tutorials and coding reference sheet is now available: http://bit.ly/3vls17
An expanded PyRosetta User's Manual is now available on the website: http://bit.ly/c0fdU
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PyRosetta v1.0 is scheduled to be released on 9/29/09! Along with the release we will have an updated tutorial and a complete manual.
DNA/RNA modeling, in the example case of a protein-DNA docking script is now available: http://bit.ly/xGX8e
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A script demonstrating structure-based mutation analysis with Alanine scanning and ddG analysis is now available: http://bit.ly/xGX8e
A sample script demonstrating the Rosetta all-atom protein relaxation protocol is now available: http://bit.ly/xGX8e
Small-molecule modeling/docking capabilities have now been added to PyRosetta. A sample script can be found here: http://bit.ly/xGX8e
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