The Phenotype Foundation facilitates development and use of the #PhenotypeDB
Joined October 2015
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.@TraITplatform has deployed the new version of the @PhenotypeDB, supporting multiple datasets of 1M+ data points: ctmm-trait.nl/news/new-versi… – at Cambridge, MA
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Dr. Bouwman: Phenotype Database is #opensource tool for capturing study design & study data e.g. chemistry, transcriptomics & metabolomics – at Utrecht, The Netherlands
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Jildau Bouwman #TNO presenting use of #opensource Obiba Opal & Phenotype Database in ENPADASI to create a nutritional database: DASH-IN #DTL – at Hoog-Catharijne NS en Jaarbeurs, Utrecht
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We are looking at linking drug phenotypic screen data & descriptions to nutrition research deep phenotyping with @PhenotypeDB & Enpadasi
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The use and needs of data sharing in biology. My keynote discussion slides at @PhenotypeDB meeting on Slideshare: slideshare.net/Chris_Evelo/u…
Ferry Jagers (TNO) presents the future developments planned for ao ENPADASI on large and #FAIR data #PhenotypeDB2016 – at Amsterdam, The Netherlands
.@Peter_Kok (@TheHyveNL) explains his favorite bugs (solved), like this icon reachable from 2 sides #PhenotypeDB2016 – at Amsterdam, The Netherlands
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For @CTMMTraIT our tester @JoStrubel created a structured test plan to create end user trust #PhenotypeDB2016 – at Amsterdam, The Netherlands
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It is almost a lesson in history now. But here is the original phenotype database (concept) paper: dx.doi.org/10.1007/s12263-01… #PhenotypeDB2016
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Jolanda Strubel: structured testing also delivers a testing template that can be used for future releases. #PhenotypeDB2016
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Jolanda Strubel works for open source development company @TheHyveNL a major phenotype database contributor #PhenotypeDB2016
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Jolanda Strubel about structured tested versus depending on end-user feedback. Helps structured fixes & increase trust #PhenotypeDB2016
The code is #OpenSource, but you don't HAVE to share your data to use it - @JildauBouwman #ENPADASI #PhenotypeDB2016 – at Amsterdam, The Netherlands
Mariska Bierkens (@CTMMTraIT) shows how to link from #tranSMART back to the source data in #PhenotypeDB and #tEPIS – at Amsterdam, The Netherlands
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Mariska Bierkens shows that real clinical studies need combination of databases, analysis combined using @tranSMART_org #PhenotypeDB2016
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Jildau Bouwman no two (high-fat) diets the same, yet we need to combine. Need hierarchy for study concepts #PhenotypeDB2016
Keynote speaker @Chris_Evelo emphasizes the hurdles in data sharing: "Don't standardize, map!" #PhenotypeDB2016 – at Amsterdam, The Netherlands
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Talking about "the use and needs of data sharing in biology” tomorrow at the Phenotype Foundation annual meeting lanyrd.com/2016/phenotypedb2…
The #PhenotypeDB2016 is kicked off with a welcome from @RJAFijneman (@CTMMTraIT @hetAVL) and @JildauBouwman (TNO) – at Amsterdam, The Netherlands
