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We are thrilled to announce that 3 amazing contributors will be joining us for Open2C’s very first Google Summer of Code ☀️! #GSOC24
A warm welcome to @alejandrogzi @TalipZengin_ Olesia Slavska!🧬💻
Looking forward to an exciting summer of coding and collaboration! 🚀🌟
Pairtools v1.1.0 is out on github and PyPI and will soon be released on bioconda!
This release fixes a few major bugs introduced into sort and dedup in recent versions and thus is highly recommended for upgrading!
Full release notes:
github.com/open2c/pairtools/…
3/ 🧑💻Finally, we are thrilled to announce that #Open2C has been selected as a host organization for @Google Summer of Code 2024!!! #GSoC2024, #GSoC24
summerofcode.withgoogle.com/…
You can see our available project ideas at github.com/open2c/open2c.git….
Interested applicants: join our #slack workspace for more info.
2/ 📜We are happy to announce the publication of our #bioframe application note in @OxUniPress #Bioinformatics! Our first publication as #Open2C 🎉
doi.org/10.1093/bioinformati…
1/ 🧬Not one, but **four** Open2C packages have been accepted as @NumFOCUS #affiliated projects!!! 🎉
#cooler #cooltools #pairtools and #bioframe
We are proud to join the #NumFOCUS family and we look forward to working with the vibrant #scientific #opensource community!
If you work with #3Dgenome 3C+ data (Hi-C, Micro-C, ...), check out pairtools (biorxiv.org/content/10.1101/…)!
This is the third preprint from @Open2C_team, and was an incredibly collaborative work, with researchers from 6 labs spanning 8 timezones. We hope future software can involve new collaborators as well. Join us on Slack (bit.ly/open2c-slack) and get involved!
See documentation at pairtools.readthedocs.io/ or pipe your data through our pairtools-powered pipeline distiller github.com/open2c/distiller-…. Feedback, questions, and pull requests welcome!