Scientist at Fiocruz Minas Bioinformatics, Genomics, Microbiome...
Belo Horizonte, Brasil
Joined February 2010
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Gabriel Fernandes retweeted
Enteropathway: the metabolic pathway database for the human gut #microbiota
congrat @takujida
biorxiv.org/content/10.1101/…
O custo de 10 milhões de testes diagnósticos é de 750 milhões. Se a sua empresa pagar isso ao governo, então você pode questionar o custo.
Esse é o custo somente dos kits diagnósticos. A doença custa muito mais caro do que qualquer empresário reaça contribui em impostos.
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Implementations of the chemical structural and compositional similarity metric in R and Python biorxiv.org/content/10.1101/…
Gabriel Fernandes retweeted
Are you an advanced PhD student or post-doc researcher applying or planning to apply high throughput sequencing technologies & bioinformatics methods in their research?
Application is open for RNA-Sequence Analysis, 8-12 Apr.
ow.ly/zbir30mYEAt
#RNA #Bioinformatics
Gabriel Fernandes retweeted
We are not self-important: we are important to the care of others
We are not anti-gun: we are anti-bullet holes in our patients
We consult with everyone but extremists
Most upsetting, actually, is death and disability from gun violence that is unparalleled in the world
Someone should tell self-important anti-gun doctors to stay in their lane. Half of the articles in Annals of Internal Medicine are pushing for gun control. Most upsetting, however, the medical community seems to have consulted NO ONE but themselves. nraila.org/articles/20181102…
Agora entendi o porquê de chamarem um astronauta para ser ministro. A Ciência do Brasil já tem data para ir pro espaço. 🚀
Orçamento proposto para CNPq só garante bolsas até setembro de 2019 www1.folha.uol.com.br/cienci…
Gabriel Fernandes retweeted
This is unfair to DADA2 😐 When someone as big as Rob Knight says "this is the best practice", it creates a nightmare for younger scientists to promote their tool.
I think, from "Deblur" to "Deblur or DADA2" would've added much more than just 9 more characters to this chart. – at Chicago, IL
Dada2 and TAG.ME. A perfect integration to get the most of your microbiome studies 😁 xitter.cf/bejcal/status/97186770…
Haven't tried, but seems a worthwhile idea -- Random Forest classification of taxonomy to short sequences. "TAGME: Taxonomic Assignment of Genetic Markers for Ecology"
Preprint: biorxiv.org/content/early/20…
Code: github.com/gabrielrfernandes…
Documentation: gabrielrfernandes.github.io/…
A new taxonomic classification tool for marker genes based on RandomForest. Microbiome studies going deeper into species level :)
TAG.ME: Taxonomic Assignment of Genetic Markers for Ecology biorxiv.org/content/early/20…
Gabriel Fernandes retweeted
EMBL-EBI in Brazil Nov14; courses on animal genomes:goo.gl/b5baJF and metagenomics:goo.gl/cilGMW @benilton @FernandesGR
Gabriel Fernandes retweeted
Goodbye to our @bbsrc Brazil award trainers after 2 weeks of swapping ideas, busy but fun! #training #bioinformatics
Gabriel Fernandes retweeted
5 crucial questions to ask when conducting or evaluating microbiome research nature.com/news/microbiology…
Exercise induction of gut microbiota modifications in obese, non-obese and hypertensive rats biomedcentral.com/1471-2164/… #bmcgenomics