@Emma______C

Bioinformatics PhD Student 👩‍💻🍄 Anciennement VP JeBiF | Program comitee member SCS | Élue CFVU 2020-2022 ... 📍Lyon, Rouen, Grenoble, Nancy +7 🦖

Joined December 2020
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Excited to share the published version of our paper: Thermal Adaptation in Worldwide Collections of a Major Fungal Pathogen 🌍🔥 Congrats to @MinanaPosada and @AliceFeurtey for leading this great work! 🎉 Read it here: apsjournals.apsnet.org/doi/1…

Thermal Adaptation in Worldwide Collections of a Major Fungal Pathogen | Molecular Plant-Microbe...

Adaptation to new climates poses a significant challenge for plant pathogens during range expansion, highlighting the importance of understanding their response to climate to accurately forecast...

apsjournals.apsnet.org
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Dive into the massive genomes of plant pathogenic rust fungi! 🌿🍄 Our study reveals how ancestral & recent bursts of transposition have shaped these remarkable genomes. 👏 Congrats to @Emma______C on her 1st PhD paper! 🙌 @SebbyRust, Emmanuelle Morin biorxiv.org/content/10.1101/…

Ancestral and recent bursts of transposition shaped the massive genomes of plant pathogenic rust...

Background Transposable elements (TEs) play a crucial role in genome evolution, influencing gene regulation, diversity, and genome architecture. Rust fungi of the order Pucciniales (Subphylum...

biorxiv.org
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Last Friday, Félix Fracchia gave a seminar about his MAGIC🪄 project on #Genomic signatures of #Beech 🌳 local #adaptation across a water stress gradient
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For today's seminar, Ségolène Bouche talks about her PhD project on "Identification of the mechanisms, genes and regulatory factors potentially or demonstrated to be involved in the mineral weathering ability of Pseudomonas sp. PML3(3)" #StoneEatingBacteria #MicrobialEcology
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#PLOSPathogens: Use of the Puccinia sorghi haustorial transcriptome to identify and characterize AvrRp1-D recognized by the maize Rp1-D resistance protein dx.plos.org/10.1371/journal.…
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Researchers from ETH Zurich have investigated how everyday routines could be used for secure and user-friendly authentication for Smart Homes – with no need for cumbersome passwords. brnw.ch/21wOBpu

Everyday routines as the key to logging in

Smart homes are intended to make life easier, but logging into individual devices is often still an onerous task. Researchers from ETH Zurich have investigated how everyday routines could be used for...

ethz.ch
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Claire Veneault-Fourrey @UMR_IAM a ensuite pris la parole pour évoquer les avancées des 15 dernières années qui ont permis une meilleure compréhension du rôle et du fonctionnement de la symbiose mycorhizienne et du microbiote associé aux arbres – at Champenoux, France
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Our Tansley Insight is out @NewPhyt !!! nph.onlinelibrary.wiley.com/…. From synthetic communities to synthetic ecosystems: exploring causalities in plant-microbe-environment interactions. Big congrats @Chesneau_G, @HerpellJohannes @mpipz_cologne #SynComs #SynEcos.
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It is out: "Analyses of transposable elements in arbuscular mycorrhizal fungi support evolutionary parallels with filamentous plant pathogens" @Blunt_Microbe @Ken_M_Mugambi biorxiv.org/content/10.1101/…

Analyses of transposable elements in arbuscular mycorrhizal fungi support evolutionary parallels...

Transposable elements (TEs) are repetitive DNA sequences that excise or create copies that are inserted elsewhere in the genome. Their expansion shapes genome variability and evolution by impacting...

biorxiv.org
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Pioneer Fellow Hao Liu uses lasers to produce microfilament structures to grow biological tissue in the lab for research and medicine – from muscle tissue to cartilage. Now he’s working to ready this technology for the market. ethz.ch/en/news-and-events/e…

His delicate filament scaffolds allow cells to grow perfectly

Pioneer Fellow Hao Liu uses lasers to produce microfilament structures to grow biological tissue in the lab for research and medicine – from muscle tissue to cartilage. Now he’s working to ready this...

ethz.ch
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We compared genomes at every level, from the nucleotide to the chromosome, and from the single gene or TE to the whole proteome. The findings were almost too many for a single publication... almost. 😇 doi.org/10.1371/journal.pgen…

Pangenome graph analysis reveals extensive effector copy-number variation in spinach downy mildew

Author summary Plant pathogens are known to evolve rapidly and overcome disease resistance of newly introduced crop varieties. This swift adaptation is visible in the genomes of these pathogens,...

journals.plos.org
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🔬✨ Coup d'envoi de la Journée des Docs & Postdocs du @labexARBRE par son directeur, Stéphane Uroz.🌳 Au programme : des tables rondes, des exposés scientifiques et des présentations de posters autour des recherches menées sur la biologie de l'arbre et les écosystèmes forestiers
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Let’s go Labex Doc-Postdoc day 2024. First presentation by Labex chef ⁦@steph_Uroz⁩ @UMR_IAM⁩.
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3t-seq: automatic gene expression analysis of single-copy genes, transposable elements, and tRNAs from RNA-seq data academic.oup.com/bib/article…

3t-seq: automatic gene expression analysis of single-copy genes, transposable elements, and tRNAs...

Abstract. RNA sequencing is the gold-standard method to quantify transcriptomic changes between two conditions. The overwhelming majority of data analysis

academic.oup.com
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For today's seminar, we are delighted to welcome Dr. Judith Lundberg-Felten (@mycopat @_SLU, also a @UMR_IAM PhD alumna) who will talk about “Ectomycorrhizal symbiosis – from molecules and cells to forest management”
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🚨 Exciting news! My latest research on Mycodiplosis fly larvae and rust fungi is published! We screened over 5,000 rust specimens globally and built the first 5-gene phylogenetic tree of Mycodiplosis. Check out our groundbreaking findings: academic.oup.com/jinsectscie…
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#IMC12 - This week, Elsa HILAIRE (@UMR_IAM) presented her thesis work at IMC12 (@IMC12NL): Fungal necromass chemistry shapes functional diversity of its necrobiome in forest soils (ID 1136)
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Transposon-derived introns as an element shaping the structure of eukaryotic genomes dlvr.it/TB8jhs
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Last Friday, we had our first Olymp'IAM (@UMR_IAM Olympics). A little competition and a lot of fun and laughter! Thanks to Solène, Sandrine and Mathilde for the perfect organization!
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