@DeepTrackAI

Microscopy with Deep Learning

Joined October 2021
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New stable release of DeepTrack2 1.5.6! github.com/softmatterlab/Dee… PyPi 1.5.6 pypi.org/project/deeptrack/1… DeepTrack2 1.5.6 is a patch that fixed an issue with the endothelial_vs dataset and an issue with repeated oneof-features.

Release DeepTrack2 1.5.6 · DeepTrackAI/DeepTrack2

Stable release of DeepTrack2 1.5.6 Release date: 13 April 2023 PyPi 1.5.6 https://pypi.org/project/deeptrack/1.5.6/ DeepTrack2 1.5.6 is a patch that fixed an issue with the endothelial_vs dataset a...

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New stable release of DeepTrack2 1.5.2! github.com/softmatterlab/Dee… PyPi 1.5.2 pypi.org/project/deeptrack/1… DeepTrack2 1.5.2 is a patch with improvements to attention layers, new datasets to train GNNs and virtual staining NN, and improved Mie optics.

Release DeepTrack2 1.5.2 · DeepTrackAI/DeepTrack2

Stable release of DeepTrack2 1.5.2 Release date: 13 December 2022 PyPi 1.5.2 https://pypi.org/project/deeptrack/1.5.2/ DeepTrack2 1.5.2 is a patch: Several improvements to the code of the attentio...

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LodeSTART. A new #deeplearning method based on DeepTrack is now published in @NatureComms It detects microscopic objects with sub-pixel accuracy from a single unlabeled image by exploiting roto-translational symmetries
Giovanni Volpe@VolpeResearch6 Dec 2022
Our new method to to train neural networks with a single image and without ground truth, @DeepTrackAI LodeSTAR, is published in @NatureComms Find out more nature.com/articles/s41467-0… An effort led by @BMidtvedt
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New stable release of DeepTrack2 1.5.1! github.com/softmatterlab/Dee… PyPi 1.5.1 pypi.org/project/deeptrack/1… DeepTrack2 1.5.1 is a patch with some fixes to the Mie scatterers.

Release DeepTrack2 1.5.1 · DeepTrackAI/DeepTrack2

Stable release of DeepTrack2 1.5.1 Release date: 21 November 2022 PyPi 1.5.1 https://pypi.org/project/deeptrack/1.5.1/ DeepTrack2 1.5.1 is a patch: Fixed an issue using MieScatterer with the Repea...

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New stable release of DeepTrack2 1.5.0! github.com/softmatterlab/Dee… PyPi 1.5.0 pypi.org/project/deeptrack/1… DeepTrack2 1.5.0 is a minor release 1/2

Release DeepTrack2 1.5.0 · DeepTrackAI/DeepTrack2

Stable release of DeepTrack2 1.5.0 Release date: 1 November 2022 PyPi 1.5.0 https://pypi.org/project/deeptrack/1.5.0/ DeepTrack2 1.5.0 is a minor release that includes, amongst many other not-so-ex...

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DeepTrack2 1.5.0 includes: - a new time-distributed convolutional neural network model (TimeDistributedFullyConvolutional) - multi-input support for continuous generators - several improvements to the Mie physics simulation code - many other not-so-exciting bug fixes 2/2
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DeepTrack 2.1.0.0 is now released! github.com/softmatterlab/Dee… PyPI version 1.0.0 pypi.org/project/deeptrack/1… DeepTrack 2.1 is a major release focusing on enhancing performance, stability, and the convenience of using DeepTrack. 1/5
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If you are already using DeepTrack 2.0 (pypi version 0.x.x), updating to DeepTrack 2.1 (pypi version 1.0.0) should be painless, as no change to your code is needed, if you have followed deprecation warnings. 4/5
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There are two breaking changes: 1. The deprecated operator + to chain features has been removed. It is now only possible using the >> operator. 2. The deprecated operator ** to duplicate a feature has been removed. It is now only possible using the ^ operator. 5/5
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DeepTrack 2.0.11.5 is now released (minor changes to align the GitHub and PyPI versions) github.com/softmatterlab/Dee…

Release DeepTrack2 0.11.5 · DeepTrackAI/DeepTrack2

Stable release of DeepTrack2 0.11.5 Release date: 29 January 2022 PyPi 0.11.5 https://pypi.org/project/deeptrack/0.11.5/ Cite as: Benjamin Midtvedt, Saga Helgadottir, Aykut Argun, Jesús Pineda, Dan...

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DeepTrack 2.0.11.4 is now released fixing several bugs github.com/softmatterlab/Dee…

Release 2.0.11.4: Merge pull request #81 from softmatterlab/develop · DeepTrackAI/DeepTrack2

Minor bug-fixes for v2.0

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