
🌈Evolution, Bacteria, Phage, Models, Experiments, Technology #LabAutomation #PostDoc @UniofExeter 🇬🇧 #PhD @iitbombay 🇮🇳 MSc SysBio @HydUniv
Stevenage, UK
Joined October 2013
- Tweets148
- Following445
- Followers108
- Likes1.3K
Dibyendu Dutta retweeted
📢Abstract deadline extended to March 6, 2026 for the CSH Asia AI & Biology meeting.
We welcome both short talk and poster submissions.
Updated speaker list - check it out, and we look forward to seeing you at the meeting!
Dibyendu Dutta retweeted
BREAKING: Apple just proved AI "reasoning" models like Claude, DeepSeek-R1, and o3-mini don't actually reason at all.
They just memorize patterns really well.
Here's what Apple discovered:
(hint: we're not as close to AGI as the hype suggests)
Dibyendu Dutta retweeted
What happens to bacterial genomes when they're cloned into yeast? Do they transcribe, do they get silenced, do they get packaged away from the rest of the DNA? This cool study congrats to the Koszul lab team at Pasteur for this great work science.org/doi/10.1126/scie…
Dibyendu Dutta retweeted
"Oh, I'm a *pure* mathematician, I don't write code/do calculations/etc.."
"Oh, I'm a *theoretical* physicist, I don't do experiments/analyze data/etc.."
Etc.
These kinds of statements are typically uttered with an air of intellectual smugness. But what are they really? (1/6)
Dibyendu Dutta retweeted
We've just launched the 2025 Systems Biology Postdoctoral Call for candidates to join our Institute
Dibyendu Dutta retweeted
How bigs are the cells?
Microorganisms in perspective 🦠
[🎞️ MetaBallStudios]
Dibyendu Dutta retweeted
🔬 Journey into the world of Phage Therapy with Dibyendu Dutta at the Bootlegger on Monday, May 13th! Explore the captivating potential of bacteriophages in battling antibiotic-resistant bacteria. Join us for an enlightening discussion! @CuriousModeller #PhageTherapy #Pint24
Dibyendu Dutta retweeted
What Biology Can Learn from Physics 🚀
World War II shifted physics from a field of brilliant individuals to one of well-managed teams. CERN, LIGO, and the JWST all cost >$1 billion.
Biology has had a few "moonshots," but not nearly as many. Why not?
Read: readcodon.com/p/biology-phys…
***
There are probably a few reasons. First, biology research is inherently broad. A zoologist, ecologist, and protein engineer all call themselves “biologists,” but rarely attend the same conferences. Biological discoveries are also made organically, with thousands of teams chipping away at problems. And it's opaque; researchers don’t share their results until a paper is published. These quirks make it difficult to coordinate on large problems.
The foundation of physics has been built over several centuries, thanks to a constant back-and-forth dialogue between theory and experiment. Progress in biology will similarly accelerate once the field builds predictive models that can accurately anticipate the outcome of experiments before they have taken place.
AlphaFold2, a model that predicts protein structures, was a great start. But now, biologists should work to build predictive models at more scales: from molecules, to whole cells, to the behavior of cells at the macroscale. This is what @Align_Bio and others are doing. But it will require large-scale funding and coordination amongst biologists.
The last century of biology looked like an organic and exploratory process, with many small groups discovering and rediscovering curiosities. But the next century may resemble a coordinated, whole-field effort to divide biology into a series of prediction tasks and then solve those tasks, one-by-one.
This piece was written with @erika_alden_d.
Dibyendu Dutta retweeted
Introducing "data-to-paper": autonomous AI research! We've let it play with the large CDC Health Survey Dataset. Went to lunch. When back, it had already chosen several research topics, wrote data analysis codes, interpreted results and wrote 5 transparent, reproducible papers.
Dibyendu Dutta retweeted
You think ChatGPT is impressive?
Wait till you see Microsoft's new Bing. It'll blow you mind away.
Here's a comparison of ChatGPT and Bing for:
• Outlining a research paper
• Brainstorming research questions
Dibyendu Dutta retweeted
I have an @EPSRC funded PhD position to work with myself and @michaelsulu, using model microbial communities to improve our understanding of how communities can be used for future bio-industry
Get in touch if you're interested and please share/RT
ucl-epsrc-dtp.github.io/2023…
Dibyendu Dutta retweeted
That project was going so well until we ran the gel.
N.B.: helmet??
xitter.cf/BornAKang/status/16046…
Dibyendu Dutta retweeted
In synthetic biology classes, I ask students what biological function they want to create, and one popular answer is "photosynthesis in mammals".
Now, it's achieved! The authors transplanted membrane-coated thylakoids into chondrocytes and mice! Congrats!
nature.com/articles/s41586-0…
Dibyendu Dutta retweeted
Amazing: The plus signs aren’t moving, expanding, contracting, or rotating at all. Another masterpiece by @jagarikin.
Dibyendu Dutta retweeted
Engineered synthetic one-carbon fixation exceeds yield of the Calvin Cycle
biorxiv.org/cgi/content/shor…
Dibyendu Dutta retweeted
Incredible camouflage of the Kallima inachus butterfly.
xitter.cf/SteveStuWill/status/12…
Dibyendu Dutta retweeted
Do you know that Pseudomonas aeruginosa (Pa) can push its competitor, Klebsiella pneumoniae, away? Here is a movie to show you how. @pseudocap @pseudo_papers
Read more in our preprint
biorxiv.org/content/10.1101/…
Dibyendu Dutta retweeted
New manuscript🚨by @aaronlove89! As #synbio systems get more complex, we want to understand how to minimize burden. There’ve been fantastic papers recently (@ProfTomEllis @Moon_Synth_Bio #DelVecchio+many) – but most don’t focus on the molecular mechanism.
biorxiv.org/content/10.1101/…
Dibyendu Dutta retweeted
1/ New paper! nature.com/articles/s41586-0… with @_szhang @aaronclauset @DanLarremore.
🎓 We analyzed all 295K tenure-track faculty at US PhD-granting universities in 10,612 departments over 10 years to quantify hierarchy and dynamics in US faculty hiring and retention.
🦥 A summary:



























