@CPR_DPANN_jp

日本CPR/DPANN研究会のアカウントです。CPRバクテリアとDPANNアーキアに関する情報を発信します。

sites.google.com/view/cpr-dpann-kenkyukai/
Joined May 2023
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Single-Cell Genomics Uncovers an Unexpectedly Abundant, Phylogenetically Hyperdiverse Patescibacteria (Candidate Phyla Radiation) Community in Agricultural Paddy Soil mdpi.com/2076-2607/14/10/221…

Single-Cell Genomics Uncovers an Unexpectedly Abundant, Phylogenetically Hyperdiverse Patescibact...

Patescibacteria, also known as the Candidate Phyla Radiation (CPR), are among the most diverse yet functionally reduced bacterial lineages whose diversity in agricultural soils remains poorly...

mdpi.com
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A hidden archaeal lineage with an ultra-reduced genome retaining only its replicative core cell.com/current-biology/abs…

A hidden archaeal lineage with an ultra-reduced genome retaining only its replicative core

Harada et al. describe an archaeon, recovered from a single marine plankton cell, whose 238-kb genome is the smallest known for the domain. It has lost nearly all metabolism but keeps the machinery...

cell.com
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Host Cell Wall Polysaccharides Modulate Nanosynbacteria Recognition and Attachment biorxiv.org/content/10.64898…
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Expanding the global diversity of Nanobdellales from deep-sea hydrothermal vents doi.org/10.1093/ismeco/ycag2…

Expanding the global diversity of Nanobdellales from deep-sea hydrothermal vents

Abstract. The archaeal symbiotic Nanobdellales have been isolated with their hosts from a shallow hot marine vent off Iceland and from terrestrial hot spri

academic.oup.com
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A host-encoded prophage targets a Candidate Phyla Radiation bacterium and shapes episymbiotic interactions pnas.org/doi/10.1073/pnas.26…

A host-encoded prophage targets a Candidate Phyla Radiation bacterium and shapes episymbiotic...

The Patescibacteriota, also known as the Candidate Phyla Radiation (CPR), represent a large lineage of ultrasmall bacteria with highly reduced geno...

pnas.org
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A genomic catalog of Earth’s bacterial and archaeal symbionts nature.com/articles/s41587-0…

A genomic catalog of Earth’s bacterial and archaeal symbionts

Nature Biotechnology - Symbiotic relationships of microorganisms are predicted and cataloged with a machine learning tool.

nature.com
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Methyltransferases in Candidate Phyla Radiation: A Weapon or a Simple Shield? biorxiv.org/content/10.64898…

Methyltransferases in Candidate Phyla Radiation: A Weapon or a Simple Shield?

The Candidate Phyla Radiation (CPR) consists of microorganisms with highly reduced genomes and limited metabolic capabilities, including the inability to synthesize nucleotides and amino acids....

biorxiv.org
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A representative of a ubiquitous bacterial lineage parasitically feeds on host RNA biorxiv.org/content/10.64898…

A representative of a ubiquitous bacterial lineage parasitically feeds on host RNA

Cellular metabolism is widely understood as an integrated network of redox reactions, energy conservation, and biosynthetic pathways. Here we show that across diverse prokaryotic lineages, loss of...

biorxiv.org
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Insertions in universal proteins confirm that Nanohaloarchaea belong to DPANN-Archaea and suggest several new major archaeal clades biorxiv.org/content/10.64898…

Insertions in universal proteins confirm that Nanohaloarchaea belong to DPANN-Archaea and suggest...

The phylogenetic position of Nanohaloarchaea has been debated, these nanosized archaea being alternatively proposed as sister group to Haloarchaea , members of the DPANN -Archaea , or sister group to...

biorxiv.org
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Revised 16S rRNA V4 hypervariable region targeting primers enhance detection of Patescibacteria and other lineages across diverse environments academic.oup.com/ismecommun/…

Revised 16S rRNA V4 hypervariable region targeting primers enhance detection of Patescibacteria and...

Abstract. Primer bias in 16S rRNA gene amplicon sequencing can distort microbial diversity estimates by underrepresenting key taxa. We introduce a modified

academic.oup.com
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A Tripartite Co-culture System Reveals Defensive Mutualism Between a Nanobdellati Symbiont and Its Host biorxiv.org/content/10.64898…
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Rare Phyla, Such as CPR and DPANN, Shape Ecosystem-Level Microbial Community Structure Dissimilarities link.springer.com/article/10…

Rare Phyla, Such as CPR and DPANN, Shape Ecosystem-Level Microbial Community Structure Dissimilar...

Microbial Ecology - Rare microbial lineages, such as members of the candidate phyla radiation (CPR) bacteria and Diapherotrites, Parvarchaeota, Aenigmarchaeota, Nanoarchaeota, and Nanohaloarchaeota...

link.springer.com
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New lineages provide insights into the convergent evolution of extreme salt adaptation within symbiotic Archaea academic.oup.com/mbe/advance…

New lineages provide insights into the convergent evolution of extreme salt adaptation within...

Abstract. Environmental genomics has led to the discovery of many new lineages of archaea, including “DPANN” (or Nanobdellati), comprising organisms with s

academic.oup.com
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A complete-genome view of phylum Nanobdellota and recurrent Form III RuBisCO transfer between archaea and Patescibacteriota biorxiv.org/content/10.64898…
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Current Understanding of Taxonomy and Ecology of the Phylum Minisyncoccota doi.org/10.1264/jsme2.ME2508…

Current Understanding of Taxonomy and Ecology of the Phylum Minisyncoccota

The phylum Minisyncoccota (formerly known as “Candidatus Patescibacteria”/candidate phyla radiation [CPR] and designated under SeqCode as Patescibacte …

jstage.jst.go.jp
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Nanosynbacter lyticus gen. nov., sp. nov., an ultrasmall, obligate epibiont bacterium and the proposal of Nanosynbacteraceae fam. nov., Nanosynbacterales ord. nov. and Nanosynbacteria class nov. microbiologyresearch.org/con…

Nanosynbacter lyticus gen. nov., sp. nov., an ultrasmall, obligate epibiont bacterium and the...

microbiologyresearch.org
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Resolving Host-Episymbiont Interaction Dynamics through Continuous Cultivation biorxiv.org/content/10.64898…
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Patescibacteriota in soil and rhizosphere sciencedirect.com/science/ar…
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A New Small and Resilient Nucleic Acid-Binding Protein from Nanoarchaeum equitans link.springer.com/article/10…

A New Small and Resilient Nucleic Acid-Binding Protein from Nanoarchaeum equitans

Molecular Biotechnology - Nucleic acid-binding proteins (NBPs) are essential biomolecules in all organisms. They play an important role in gene regulation and expression in cells. One type of these...

link.springer.com
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Two worlds beneath: Distinct microbial strategies of the rock-attached and planktonic subsurface biosphere ...the 891 MAGs from planktonic communities were dominated by Cand. Patescibacteria (464 MAGs)... link.springer.com/article/10…

Two worlds beneath: Distinct microbial strategies of the rock-attached and planktonic subsurface...

Microbiome - Microorganisms in groundwater ecosystems exist either as planktonic cells or as attached communities on aquifer rock surfaces. Attached cells outnumber planktonic ones by at least...

link.springer.com
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