@CLIMtools

AraCLIM, provides an intuitive tool to define the environment at the site of origin of each of the accessions sequenced as part of the 1,001 Genomes Project

CLIMtools.org
Joined November 2017
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🌾 In our latest paper in Plant Communications we present Oryza CLIMtools—a new resource to explore climate-associated genetic variants in rice🌍🧬. We utilized these tools to evaluate the roles of G proteins in adapting to local climates @CLIMtools @GrameneDatabase @MPlantPCom
Molecular Plant & Plant Communications@MPlantPCom
14 Jan 2024
Oryza CLIMtools: A Genome-Environment Association Resource Reveals Adaptive Roles for Heterotrimeric G Proteins in the Regulation of Rice Agronomic Traits #resource #PlantCommunications cell.com/plant-communication…
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📢🌱The 2024 Multinational Arabidopsis Steering Committee (MASC) annual report is now available from arabidopsis.info/progreports… 🌱 Gramene has proudly integrated @CLIMtools portals for GxE associations, @emblebi Single-Cell Expression Atlas data, and @BAR_PlantBio eFP browsers.
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Oryza CLIMtools: An Online Portal for InvestigatingGenome-Environment Associations in Rice biorxiv.org/cgi/content/shor… #bioRxiv
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(1/4) Very happy to share with you the latest from the @AssmannLab and @phil_bevilacqua labs which is out now @GenomeBiology. genomebiology.biomedcentral.… What is a riboSNitch, and what is this study about? 🧵👇🏻👇🏻

Experimental demonstration and pan-structurome prediction of climate-associated riboSNitches in...

Genome Biology - Genome-wide association studies (GWAS) aim to correlate phenotypic changes with genotypic variation. Upon transcription, single nucleotide variants (SNVs) may alter mRNA structure,...

link.springer.com
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Also, check out the @CLIMtools to examine the correlations between phenotype and environment personal.psu.edu/sma3/CLIMto…
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1001 Environomes, G×E, and G×P in Arabidopsis natureecoevocommunity.nature… #behindthepaper
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Our new paper is out in @NatureEcoEvo, presenting 1,001 environomes, G×E, and G×P in Arabidopsis. Here is the read-only link to the article: rdcu.be/bgNXQ. @CLIMtools websites described in the paper can be found here: personal.psu.edu/sma3/CLIMto…. nature.com/articles/s41559-0…
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Phenotypic and genome-wide association with the local environment of Arabidopsis rdcu.be/bgVTE @AnxoFerrero
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CLIMtools in now live
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