Open-source bioinformatics libraries in Python
Worldwide
Joined March 2009
- Tweets837
- Following47
- Followers4.4K
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Biopython Project retweeted
Just ordered a pair of free 2FA keys courtesy Google Open Source Security Team for use with PyPI where a few of my projects are now deemed “critical” (plus @Biopython) pypi.org/security-key-giveaw…
Biopython Project retweeted
55 lines of #Python code to build a Multiple Sequence Alignment viewer for the terminal with the #Rich library (from @textualizeio) #bioinformatics
Biopython Project retweeted
#Biopython can handle #snapgene file! Using this feature, it's possible to easily convert many snapgene files into #genbank format files!!
Biopython Project retweeted
Our #Python bug hunt in popular, well-maintained projects (@TensorFlow, numpy, salt, sentry and @Biopython) turned up interesting stuff like undefined var reference, unreachable code, and more.
blog.sonarsource.com/sonarcl…
Biopython Project retweeted
Very happy to have my first contribution to @Biopython merged today! Hope to contribute more in the future. Shoutout to @pjacock for the patience in reviewing my PR.
#opensource #python #bioinformatics
Biopython Project retweeted
No more Bio.Alphabet in Biopython 1.78, we’re collecting some examples of changes needed here:github.com/biopython/biopyth…
Are we missing your use case?
Biopython Project retweeted
Technical discussions are hard; a few tips
gael-varoquaux.info/programm…
Some thoughts and advice on better communications in technical projects, in particular open source
Biopython Project retweeted
New #Jupyter Notebook tutorial for @Biopython - illustrates some simple #bioinformatics analysis to characterise small sequences like a #coronavirus genome github.com/chris-rands/biopy…
Biopython Project retweeted
New upload: python-biopython 1.76+dfsg-1 by Michael R. Crusoe into unstable... deb.li/i7CPG
Biopython Project retweeted
We're planning to adopt a code of conduct that will apply to the OBF and OBF member projects - if you have a favorite CoC, an important clause we shouldn't forget, or other ideas, we'd love to hear from you **by December 1st** - more here: open-bio.org/2019/11/15/crea…
Biopython Project retweeted
#OpenSource made the world a better place again at #CoFest #BOSC past weekend. This time we made contributions to BioPython, CWL and Nextflow projects by developing new features or fixing the existing issues. Many thanks to the organisers who made this possible!
Biopython Project retweeted
Just posted the @Biopython Project Update 2019 slides to the #BOSC2019 collection on F1000 f1000research.com/slides/8-1… - a lighting talk at #ISMBECCB in Basel, Thursday 25 July 2019
Biopython Project retweeted
Day84 of the #100DaysOfCode started chapter 3 of the book effective computations in physics, this book is awesome I am learning new things on every page, A must read for #Python lovers out there. my first contribution to
@Biopython, thank you so much @pjacock for your guidance.
Biopython Project retweeted
Delighted to see so many of the #CoFest2019 participants who've signed up to far (both in person and remote) have mentioned @Biopython - see you all in Basel! 🐍🇨🇭
After BOSC and #ISMBECCB, our "Collaboration Festival" (#CoFest2019) will be hosted at #DayOne in Basel, a friendly #hackathon supported by @GoogleCloud, @awscloud & @SoftwareSaved - please join us! open-bio.org/events/bosc/col…
Biopython Project retweeted
Submitted @Biopython Project Update 2019 abstract to #BOSC2019 - github.com/peterjc/talks/tre… - fingers crossed 🤞 - today is the deadline for late breaking lightning talks/posters open-bio.org/events/bosc/sub… - see you in Basel 🍐🇨🇭 #ISMBECCB
Biopython Project retweeted
Day 2 data mining the roadmap has been described and everyone is hacking. Hoorah! @Biopython for the cool functions and methods; That have been extremely useful in helping solve our hackathon problem github.com/BioinfoNet/Data-m… #openscience #openscienceke @MozillaScience @kenet_ke
Biopython Project retweeted
The results of our logo competition are in!!! 🎉🎈
89 votes were cast, and the majority voted for this beauty from @alafitamasip!
Massive thanks to all the logo competition contributors for their time and effort! You can see the other entries here: github.com/OBF/obf-docs/issu…
ALT OBF Logo with stylised helix and the words "OBF Bioinformatics Foundation"
Biopython Project retweeted
Here are the @Biopython Project Update 2018 slides, presented at #GCCBOSC in Portland f1000research.com/slides/7-9… - and the LaTeX source at github.com/peterjc/peter-tal…
Biopython Project retweeted
It's great listening to @pjacock share all of the incremental ways even mature projects like @Biopython can continue to improve and update. Better docs, code test coverage, etc... #gccbosc
